Human (GRCh37.p13)

A summary of experimental sources used in the Ensembl regulation views.

Number of experimentsFilter typeDescription
1566ShowAllAllAll experiments
1Add filterHu. Fe.Cell/TissueENCODE Reference Epigenome of IMR-90
9Add filterkeratinocyteCell/TissueENCODE Reference Epigenome of keratinocyte
6Add filterneutrophil (CB)Cell/TissueBLUEPRINT Epigenome for mature neutrophil from cord blood
27Add filterH1-hESC_2Cell/TissueRoadmap Epigenomics Mapping Consortium Epigenome (Class 1) for H1 Cells using donors/samples:56; 68; 69; 27276; 27277; 35081; 35082; 35083; CDI-01; H1-02; H1-04; H1-05; H1-06; H1-07; H1-09; H1-10; H1-12; H1-13; hESC-01; HS0995; HS0998-1; HS1032-1; HS1345-1; HS1346-1; HS1347-1
1Add filterPanc1Cell/TissuePancreatic Carcinoma
7Add filterlung_1Cell/TissueRoadmap Epigenomics Mapping Consortium Epigenome (Class 3) for Fetal Lung using donors/samples:H-22727; UW_H23266; UW_H23284
6Add filterCD4+ ab T (VB)Cell/TissueBLUEPRINT Epigenome for CD4-positive, alpha-beta T cell from venous blood
7Add filterCD8+ ab T (CB)Cell/TissueBLUEPRINT Epigenome for CD8-positive, alpha-beta T cell from cord blood
7Add filterKarpas-422Cell/TissueENCODE Reference epigenome of Karpas-422
5Add filternaive B (To)Cell/TissueBLUEPRINT Epigenome for naive B cell from tonsil
4Remove filterSK-N-SH_RACell/TissueNeuroblastoma cell line, treatment: differentiated with retinoic acid, (Biedler, et al. Morphology and Growth, Tumorigenicity, and Cytogenetics of Human Neuroblastoma Cells in Continuous Culture. Cancer Research 33, 2643-2652, November 1973.)
7Add filterCMP CD4+_1Cell/TissueRoadmap Epigenomics Mapping Consortium Epigenome (Class 2) for Primary Hematopoietic Stem Cells G-CSF-mobilized Female using donors/samples:RO_01480; RO_01508; RO_01536; RO_01549; UW_RO_01480
5Add filterCD4+ CD25+ ab Treg (PB)Cell/TissueRoadmap Epigenomics Mapping Consortium Epigenome (Class 5) for Primary T Regulatory Cells from Peripheral Blood using donors/samples:62;332
6Add filtereosinophil (VB)Cell/TissueBLUEPRINT Epigenome for mature eosinophil from venous blood
7Add filterplacentaCell/TissueRoadmap Epigenomics Mapping Consortium Epigenome (Class 5) for Placenta using donors/samples:H-24996
7Add filterovaryCell/TissueRoadmap Epigenomics Mapping Consortium Epigenome (Class 2) for Ovary
6Add filtermammary myoepithelialCell/TissueRoadmap Epigenomics Mapping Consortium Epigenome (Class 2) for Breast Myoepithelial Primary Cells using donors/samples:RM066;RM081
9Add filterPC-3Cell/TissueENCODE Reference epigenome of PC-3
9Add filtermammary epithelial_1Cell/TissueENCODE Reference Epigenome of mammary epithelial cell
1Add filterGM18951Cell/TissueB-lymphoblastoid cell line, International HapMap Project, Japanese in Tokyo, Japan, treatment: Epstein-Barr Virus transformed
6Add filtergerminal matrixCell/TissueRoadmap Epigenomics Mapping Consortium Epigenome (Class 2) for Brain Germinal Matrix using donors/samples:HuFGM02
6Add filterUCSF-4Cell/TissueRoadmap Epigenomics Mapping Consortium Epigenome (Class 2) for ES-UCSF4 Cells using donors/samples:UCSF-4*_Cell_Line_hESC
7Add filteriPS DF 6.9Cell/TissueRoadmap Epigenomics Mapping Consortium Epigenome (Class 2) for iPS DF 6.9 Cells using donors/samples:iPS-6.9-01;iPS-6.9-02
4Add filterCD38- naive B (CB)Cell/TissueBLUEPRINT Epigenome for CD38-negative naive B cell from cord blood
9Add filterPC-9Cell/TissueENCODE Reference epigenome of PC-9
6Add filterspleenCell/TissueRoadmap Epigenomics Mapping Consortium Epigenome (Class 2) for Spleen using donors/samples:STL003
6Add filterEB (CB)Cell/TissueBLUEPRINT Epigenome for erythroblast from cord blood
7Add filterNK (PB)Cell/TissueRoadmap Epigenomics Mapping Consortium Epigenome (Class 5) for Primary Natural Killer Cells from Peripheral Blood using donors/samples:RO_01679;RO_01701
7Add filtermonocyte (VB)Cell/TissueBLUEPRINT Epigenome for CD14-positive, CD16-negative classical monocyte from venous blood
8Add filterCD14+ monocyte_1Cell/TissueENCODE Reference Epigenome of CD14-positive monocyte
7Add filterforeskin melanocyte_2Cell/TissueRoadmap Epigenomics Mapping Consortium Epigenome (Class 4) for Foreskin Melanocyte Primary Cells using donors/samples:skin03
6Add filterthymus_1Cell/TissueRoadmap Epigenomics Mapping Consortium Epigenome (Class 2) for Thymus using donors/samples:STL001
6Add filteriPS-15bCell/TissueRoadmap Epigenomics Mapping Consortium Epigenome (Class 5) for iPS-15b Cells using donors/samples:62
7Add filterheartCell/TissueRoadmap Epigenomics Mapping Consortium Epigenome (Class 3) for Fetal Heart using donors/samples:H-22727; H-23524; UW_H23914; H-23468
7Add filterkidneyCell/TissueRoadmap Epigenomics Mapping Consortium Epigenome (Class 3) for Fetal Kidney using donors/samples:H-22676
6Add filterneutro myelocyteCell/TissueBLUEPRINT Epigenome for neutrophilic myelocyte from bone marrow
6Add filterforeskin keratinocyte_2Cell/TissueRoadmap Epigenomics Mapping Consortium Epigenome (Class 2) for Foreskin Keratinocyte Primary Cells using donors/samples:skin03
7Add filterstomach_2Cell/TissueRoadmap Epigenomics Mapping Consortium Epigenome (Class 2) for Gastric using donors/samples:STL003
9Add filterhepatocyteCell/TissueENCODE Reference Epigenome of human H9 derived hepatocyte
5Add filterCD4+ ab T (PB)_1Cell/TissueRoadmap Epigenomics Mapping Consortium Epigenome (Class 5) for Primary T Helper Cells from Peripheral Blood using donors/samples:62;332
6Add filterM2 (CB)Cell/TissueBLUEPRINT Epigenome for alternatively activated macrophage from cord blood
8Add filterosteoblastCell/TissueENCODE Reference Epigenome of osteoblast
6Add filterCD4+ ab T (PB)_2Cell/TissueRoadmap Epigenomics Mapping Consortium Epigenome (Class 5) for Primary T Helper Memory Cells from Peripheral Blood 1 using donors/samples:62;332
6Add filterright atriumCell/TissueRoadmap Epigenomics Mapping Consortium Epigenome (Class 2) for Right Atrium using donors/samples:STL003
8Add filtercardiac muscleCell/TissueENCODE Reference Epigenome of human RUES2 derived cardiac muscle cell
7Add filterM1 (VB)Cell/TissueBLUEPRINT Epigenome for inflammatory macrophage from venous blood
27Add filterHCT116Cell/TissueENCODE Reference epigenome for HCT116 (child)
156Add filterK562Cell/TissueENCODE Reference Epigenome of K562
6Add filterHUES48Cell/TissueRoadmap Epigenomics Mapping Consortium Epigenome (Class 5) for HUES48 Cells using donors/samples:197;201;BioSam_824
6Add filterright ventricleCell/TissueRoadmap Epigenomics Mapping Consortium Epigenome (Class 2) for Right Ventricle using donors/samples:STL001;STL003
6Add filteraortaCell/TissueRoadmap Epigenomics Mapping Consortium Epigenome (Class 2) for Aorta using donors/samples:STL003
7Add filterstomach_1Cell/TissueRoadmap Epigenomics Mapping Consortium Epigenome (Class 5) for Fetal Stomach using donors/samples:H-24639;H-24683;H-24754;H-24776
7Add filterlarge intestineCell/TissueRoadmap Epigenomics Mapping Consortium Epigenome (Class 2) for Fetal Intestine Large using donors/samples:H-24595; H-23769
7Add filtersmall intestine_1Cell/TissueRoadmap Epigenomics Mapping Consortium Epigenome (Class 2) for Fetal Intestine Small using donors/samples:H-24595; H-23769
6Add filteresophagusCell/TissueRoadmap Epigenomics Mapping Consortium Epigenome (Class 2) for Esophagus using donors/samples:STL003
7Add filtertrunk muscleCell/TissueRoadmap Epigenomics Mapping Consortium Epigenome (Class 5) for Fetal Muscle Trunk using donors/samples:H-24851
1Add filterTCell/TissueRoadmap Epigenomics Mapping Consortium Epigenome (Class 3) for Primary T cells from Cord Blood using donors/samples:CD3_39661;CD3_39804;CD3_39811;CD3_39840
6Add filterTh17Cell/TissueRoadmap Epigenomics Mapping Consortium Epigenome (Class 5) for Primary T Helper 17 Cells PMA-I Stimulated using donors/samples:62;332
85Add filterHepG2Cell/TissueENCODE Reference Epigenome of HepG2
113Add filterGM12878Cell/TissueENCODE Reference Epigenome of GM12878
1Add filterGM19193Cell/TissueB-lymphoblastoid cell line, International HapMap Project, Yoruba in Ibadan, Nigera, treatment: Epstein-Barr Virus transformed
7Add filterT (PB)Cell/TissueRoadmap Epigenomics Mapping Consortium Epigenome (Class 5) for Primary T Cells from Peripheral Blood using donors/samples:RO_01679; RO_01701
37Add filterA549Cell/TissueENCODE Reference Epigenome of A549 (treated with 0.02% ethanol)
1Add filteramnionCell/TissueRoadmap Epigenomics Mapping Consortium Epigenome (Class 5) for Placenta Amnion using donors/samples:CTL02
7Add filteradrenal glandCell/TissueRoadmap Epigenomics Mapping Consortium Epigenome (Class 5) for Fetal Adrenal Gland using donors/samples:H-24800; H-22662
21Add filterNPC_3Cell/TissueRoadmap Epigenomics Mapping Consortium Epigenome (Class 1) for H1 Derived Neuronal Progenitor Cultured Cells using donors/samples:NPC-03;NPC-04;NPC-05;NPC-06
7Add filterforeskin fibroblast_1Cell/TissueRoadmap Epigenomics Mapping Consortium Epigenome (Class 3) for Foreskin Fibroblast Primary Cells using donors/samples:skin02
68Add filterMCF-7Cell/TissueENCODE Reference Epigenome of MCF-7
6Add filterM0 (CB)Cell/TissueBLUEPRINT Epigenome for macrophage from cord blood
1Add filterastrocyte spinal cordCell/TissueENCODE astrocyte of the spinal cord
1Add filterGM19099Cell/TissueB-lymphoblastoid cell line, International HapMap Project, Yoruba in Ibadan, Nigera, treatment: Epstein-Barr Virus transformed
7Add filteriPS-20bCell/TissueRoadmap Epigenomics Mapping Consortium Epigenome (Class 4) for iPS-20b Cells
14Add filterHUVECCell/TissueENCODE Reference Epigenome of endothelial cell of umbilical vein
5Add filterEM CD8+ ab T (VB)Cell/TissueBLUEPRINT Epigenome for effector memory CD8-positive, alpha-beta T cell from venous blood
8Add filtermyotubeCell/TissueENCODE Reference Epigenome of human skeletal muscle myoblast derived myotube
1Add filterGM18505Cell/TissueB-lymphoblastoid cell line, International HapMap Project, Yoruba in Ibadan, Nigera, treatment: Epstein-Barr Virus transformed
9Add filterNPC_2Cell/TissueENCODE Reference Epigenome of human H9 derived neural progenitor cell
1Add filterastrocyte cerebellumCell/TissueENCODE astrocyte of the cerebellum
22Add filtertrophoblastCell/TissueRoadmap Epigenomics Mapping Consortium Epigenome (Class 1) for H1 Derived Trophoblast Cultured Cells using donors/samples:BMP4-05 ;BMP4-06; BMP4-09; BMP4-10
6Add filtersigmoid colonCell/TissueRoadmap Epigenomics Mapping Consortium Epigenome (Class 2) for Sigmoid Colon using donors/samples:STL001;STL003
1Add filterpancreas_2Cell/TissueENCODE Reference Epigenome of pancreas (37 year old male)
7Add filterpsoas muscleCell/TissueRoadmap Epigenomics Mapping Consortium Epigenome (Class 2) for Psoas Muscle using donors/samples:STL001; STL003
7Add filtermonocyte (CB)Cell/TissueBLUEPRINT Epigenome for CD14-positive, CD16-negative classical monocyte from cord blood
7Add filterleg muscleCell/TissueRoadmap Epigenomics Mapping Consortium Epigenome (Class 5) for Fetal Muscle Leg using donors/samples:H-24644
7Add filterthymus_2Cell/TissueRoadmap Epigenomics Mapping Consortium Epigenome (Class 5) for Fetal Thymus using donors/samples:H-24644
6Add filterCD4+ ab T (Th)Cell/TissueRoadmap Epigenomics Mapping Consortium Epigenome (Class 5) for Primary T Helper Naive Cells from Peripheral Blood using donors/samples:62;332
7Add filterpancreasCell/TissueRoadmap Epigenomics Mapping Consortium Epigenome (Class 2) for Pancreas using donors/samples:STL003
1Add filterPFSK-1Cell/TissueNeuroectodermal cell line derived from a cerebral brain tumor
12Add filterastrocyteCell/TissueENCODE Reference Epigenome of astrocyte
33Add filterSK-N.Cell/TissueENCODE Reference Epigenome of SK-N-SH
53Add filterH1-hESC_3Cell/TissueENCODE Reference Epigenome of H1-hESC
5Add filterCD8+ ab T (PB)Cell/TissueRoadmap Epigenomics Mapping Consortium Epigenome (Class 4) for Primary T CD8+ Naive Cells from Peripheral Blood using donors/samples:Donor_100_7_pooled_leukopaks_Jan_7_2011;Donor_101_8_pooled_leukopaks_Jan_20_2011;TC001;TC010
9Add filterHSMMCell/TissueENCODE Reference Epigenome of skeletal muscle myoblast
6Add filterHUES6Cell/TissueRoadmap Epigenomics Mapping Consortium Epigenome (Class 5) for HUES6 Cells using donors/samples:199;207
5Add filterendocrine pancreasCell/TissueRoadmap Epigenomics Mapping Consortium Epigenome (Class 4) for Pancreatic Islets using donors/samples:pancreatic_islets_normal_0/0/00; pancreatic_islets_normal_3/27/09; ZD4_273
20Add filterMSCCell/TissueRoadmap Epigenomics Mapping Consortium Epigenome (Class 1) for H1 Derived Mesenchymal Stem Cells using donors/samples:MSC-01;MSC-02
5Add filterforeskin melanocyte_1Cell/TissueRoadmap Epigenomics Mapping Consortium Epigenome (Class 3) for Foreskin Melanocyte Primary Cells using donors/samples: skin01
1Add filtertransverse colonCell/TissueENCODE transverse colon male adult (37 years)
6Add filterlung_2Cell/TissueRoadmap Epigenomics Mapping Consortium Epigenome (Class 2) for Lung using donors/samples:STL002
6Add filterEPC (VB)Cell/TissueBLUEPRINT Epigenome for adult endothelial progenitor cell from venous blood
8Add filterbipolar neuronCell/TissueENCODE Reference Epigenome of human GM23338 derived bipolar neuron
6Add filterEM CD4+ ab T (PB)Cell/TissueRoadmap Epigenomics Mapping Consortium Epigenome (Class 5) for Primary T Cells Effector/Memory Enriched from Peripheral Blood using donors/samples:62;332
5Add filterCD4+ ab T (CB)Cell/TissueBLUEPRINT Epigenome for CD4-positive, alpha-beta T cell from cord blood
4Add filterGM12892Cell/TissueB-lymphocyte, lymphoblastoid, International HapMap Project, CEPH/Utah pedigree 1463, treatment: Epstein-Barr Virus transformed
6Add filterCM CD4+ ab T (VB)Cell/TissueBLUEPRINT Epigenome for central memory CD4-positive, alpha-beta T cell from venous blood
8Add filterDND-41Cell/TissueENCODE Reference Epigenome of DND-41
6Add filterH9_2Cell/TissueENCODE Reference Epigenome of H9
6Add filterHUES64Cell/TissueRoadmap Epigenomics Mapping Consortium Epigenome (Class 2) for HUES64 Cells using donors/samples:196;202;BioSam_825
5Add filterneurosphere (GE)Cell/TissueRoadmap Epigenomics Mapping Consortium Epigenome (Class 2) for Ganglion Eminence Derived Primary Cultured Neurospheres using donors/samples:HuFNSC02
8Add filterNHLFCell/TissueENCODE Reference Epigenome of fibroblast of lung
4Add filterCD8+ ab T (VB)Cell/TissueBLUEPRINT Epigenome for CD8-positive, alpha-beta T cell from venous blood
5Add filterCMP CD4+_2Cell/TissueRoadmap Epigenomics Mapping Consortium Epigenome (Class 5) for Primary Hematopoietic Stem Cells Short Term Culture using donors/samples:123;cultured_CD34_2_20_09
6Add filterbrain_2Cell/TissueRoadmap Epigenomics Mapping Consortium Epigenome (Class 4) for Fetal Brain Female using donors/samples:HuFNSC01; HuFNSC02; H-22911
6Add filterMSC (VB)Cell/TissueBLUEPRINT Epigenome for mesenchymal stem cell of the bone marrow from venous blood
1Add filterGM10847Cell/TissueB-lymphoblastoid cell line, International HapMap Project, CEPH/Utah, treatment: Epstein-Barr Virus transformed; treated with TNFa
5Add filterCD38- naive B (VB)Cell/TissueBLUEPRINT Epigenome for CD38-negative naive B cell from venous blood
6Add filterbrain_1Cell/TissueRoadmap Epigenomics Mapping Consortium Epigenome (Class 3) for Fetal Brain Male using donors/samples:H-22510;UW_H22676
27Add filterH9_1Cell/TissueRoadmap Epigenomics Mapping Consortium Epigenome (Class 1) for H9 Cells using donors/samples:H9-01;H9-02;H9-04
6Add filterGM12891Cell/TissueB-lymphocyte, lymphoblastoid, International HapMap Project, CEPH/Utah pedigree 1463, treatment: Epstein-Barr Virus transformed
7Add filterendodermalCell/TissueRoadmap Epigenomics Mapping Consortium Epigenome (Class 2) for hESC Derived CD184+ Endoderm Cultured Cells using donors/samples:262;263
5Add filterNPC_1Cell/TissueRoadmap Epigenomics Mapping Consortium Epigenome (Class 5) for H9 Derived Neuronal Progenitor Cultured Cells using using donors/samples:113
1Add filterGM15510Cell/TissueB-lymphoblastoid cell line, NIGMS Human Genetic Cell Repository, DNA Polymorphism Discovery Resource Collection, treatment: Epstein-Barr Virus transformed
7Add filtermammary epithelial_2Cell/TissueRoadmap Epigenomics Mapping Consortium Epigenome (Class 3) for Breast variant Human Mammary Epithelial Cells (vHMEC) using donors/samples:RM035
50Add filterHeLa-S3Cell/TissueENCODE Reference Epigenome of HeLa-S3
6Add filterforeskin fibroblast_2Cell/TissueRoadmap Epigenomics Mapping Consortium Epigenome (Class 3) for Foreskin Fibroblast Primary Cells using donors/samples:skin01
1Add filterGM18526Cell/TissueB-lymphoblastoid cell line, International HapMap Project, Han Chinese in Beijing, China, treatment: Epstein-Barr Virus transformed
6Add filterM1 (CB)Cell/TissueBLUEPRINT Epigenome for inflammatory macrophage from cord blood
6Add filterCMP CD4+_3Cell/TissueRoadmap Epigenomics Mapping Consortium Epigenome (Class 3) for Primary hematopoietic Stem Cells G-CSF-mobilized Male using donors/samples:RO_01562
1Add filtermononuclear (PB)Cell/TissueRoadmap Epigenomics Mapping Consortium Epigenome (Class 4) for Primary Mononuclear Cells from Peripheral Blood using donors/samples:TC010;TC012
7Add filteriPS DF 19.11Cell/TissueRoadmap Epigenomics Mapping Consortium Epigenome (Class 2) for iPS DF 19.11 Cells using donors/samples:iPS-19.11-01; iPS-19.11-02
9Add filterBCell/TissueENCODE Reference Epigenome of B cell
7Add filterM2 (VB)Cell/TissueBLUEPRINT Epigenome for alternatively activated macrophage from venous blood
6Add filternaive B (VB)Cell/TissueBLUEPRINT Epigenome for naive B cell from venous blood
6Add filterleft ventricleCell/TissueRoadmap Epigenomics Mapping Consortium Epigenome (Class 2) for Left Ventricle using donors/samples:STL001;STL003
7Add filtersmall intestine_2Cell/TissueRoadmap Epigenomics Mapping Consortium Epigenome (Class 2) for Small Intestine using donors/samples:STL001; STL003
6Add filterCD4+ ab TCell/TissueRoadmap Epigenomics Mapping Consortium Epigenome (Class 5) for Primary T Helper Cells PMA-I Stimulated using donors/samples:62;332
8Add filterdermal fibroblastCell/TissueENCODE Reference Epigenome of fibroblast of dermis
7Add filterB (PB)Cell/TissueRoadmap Epigenomics Mapping Consortium Epigenome (Class 5) for Primary B cells from Peripheral Blood using donors/samples:RO_01679;RO_01701
38Add filterIMR-90Cell/TissueRoadmap Epigenomics Mapping Consortium Epigenome (Class 1) for Fetal Lung Fibroblasts Cell Line using donors/samples:IMR90_r1;IMR90-04;IMR90-05;IMR90-06;IMR90-07
6Add filterHUVEC-prol (CB)Cell/TissueBLUEPRINT Epigenome for endothelial cell of umbilical vein (proliferating) from cord blood
7Add filterM0 (VB)Cell/TissueBLUEPRINT Epigenome for macrophage from venous blood
9Add filterA673Cell/TissueENCODE Reference Epigenome of A673
5Add filterneuronCell/TissueRoadmap Epigenomics Mapping Consortium Epigenome (Class 5) for H9 Derived Neuron Cultured Cells using donors/samples:113
6Add filterneutrophil (PB)Cell/TissueRoadmap Epigenomics Mapping Consortium Epigenome (Class 5) for Primary Neutrophils from Peripheral Blood using donors/samples:23
7Add filterneurosphere (C)Cell/TissueRoadmap Epigenomics Mapping Consortium Epigenome (Class 4) for Cortex Derived Primary Cultured Neurospheres using donors/samples:HuFNSC02
7Add filterneutrophil (VB)Cell/TissueBLUEPRINT Epigenome for mature neutrophil from venous blood
7Add filterCD14+ monocyte (PB)Cell/TissueRoadmap Epigenomics Mapping Consortium Epigenome (Class 5) for Primary Monocytes from Peripheral Blood using donors/samples:RO_01701;RO_01721
9Add filterMM.1SCell/TissueENCODE Reference epigenome of MM.1S
857Add filterHists & PolsEvidence typeHistone modifications & RNA polymerases
709Add filterOpen chromatin & TFBSEvidence typeOpen chromatin & Transcription factor binding sites
155Add filterBLUEPRINTProjectA BLUEPRINT of Haematopoietic Epigenomes
841Add filterENCODEProjectThe ENCODE Project
570Add filterRoadmap EpigenomicsProjectThe NIH Roadmap Epigenomics Mapping Consortium

Showing 4/1566 experiments

Filters applied: SK-N-SH_RA (remove)

SourceProjectEvidence TypeCell typeEvidenceTranscription Factor GenePWMs
ENCODEENCODEOpen chromatin & TFBSSK-N-SH_RAUSF1ENSG00000158773ENSPFM0024
ENCODEENCODEOpen chromatin & TFBSSK-N-SH_RAYy1ENSG00000100811ENSPFM0614
ENCODEENCODEOpen chromatin & TFBSSK-N-SH_RAp300
ENCODEENCODEOpen chromatin & TFBSSK-N-SH_RARad21