Transcript: ENST00000595671.1 ZIM2-001

Description

zinc finger, imprinted 2 [Source:HGNC Symbol;Acc:12875]

Gene Synonyms

PW1, ZKSCAN22, ZNF656, ZNF904, ZSCAN24

Location

Chromosome 19: 57,285,962-57,347,446 reverse strand.

About this transcript

This transcript has 12 exons, is annotated with 4 domains and features, is associated with 27811 variant alleles and maps to 368 oligo probes.

Gene

This transcript is a product of gene ENSG00000269699.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000391708.3	ZIM2-202	2253	527aa	ENSP00000375589.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33123	Q9NZV7	NM_001146327.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000599935.1	ZIM2-005	2226	527aa	ENSP00000468984.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33123	Q9NZV7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000221722.5	ZIM2-201	2090	527aa	ENSP00000221722.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33123	Q9NZV7	NM_015363.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000593711.1	ZIM2-002	2083	527aa	ENSP00000472306.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33123	Q9NZV7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000601070.1	ZIM2-004	1965	527aa	ENSP00000470326.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33123	Q9NZV7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000593931.1	ZIM2-007	483	66aa	ENSP00000469173.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0QXH8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000595671.1	ZIM2-001	2054	193aa	ENSP00000469185.1	Nonsense mediated decay		M0QXI3	-	-
ENST00000597281.1	ZIM2-003	2037	162aa	ENSP00000471643.1	Nonsense mediated decay		M0R155	-	-
ENST00000596270.1	ZIM2-006	561	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 8, Transcript length: 2,054 bps, Translation length: 193 residues

Version

ENST00000595671.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000416095 (version 1)

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Transcript: ENST00000595671.1 ZIM2-001

Summary