Transcript: ENST00000596998.1 OPN1MW-002

Description

opsin 1 (cone pigments), medium-wave-sensitive [Source:HGNC Symbol;Acc:4206]

Gene Synonyms

CBBM, CBD, COD5, GCP, GOP, OPN1MW1

Location

Chromosome HG1497_PATCH: 153,358,526-153,364,605 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 12 domains and features, is associated with 792 variant alleles and maps to 378 oligo probes.

Gene

This transcript is a product of gene ENSG00000268221.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq	Flags
ENST00000595290.1	OPN1MW-001	1257	364aa	ENSP00000472316.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P04001	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000596998.1	OPN1MW-002	590	164aa	ENSP00000469055.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000595330.1	OPN1MW-003	692	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 590 bps, Translation length: 164 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000596998.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project, projected to the alternate locus via a mapping from the primary assembly.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000280568 (version 1)

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Transcript: ENST00000596998.1 OPN1MW-002

Summary