Transcript: ENST00000529983.2 GALNT4-001

Description

UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 4 (GalNAc-T4) [Source:HGNC Symbol;Acc:4126]

Gene Synonyms

GALNAC-T4, GALNACT4, GalNAc-T4

Location

About this transcript

This transcript has 1 exon, is annotated with 14 domains and features, is associated with 2684 variant alleles and maps to 344 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000529983.2	GALNT4-001	5399	578aa	ENSP00000436604.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53817	Q8N4A0	NM_003774.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000413530.1	GALNT4-201	1486	406aa	ENSP00000389686.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 1, Coding exons: 1, Transcript length: 5,399 bps, Translation length: 578 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8N4A0

CCDS

This transcript is a member of the Human CCDS set: CCDS53817

Version

ENST00000529983.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000388973 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.