Transcript: ENST00000378485.1 CLLU1-003

Description

chronic lymphocytic leukemia up-regulated 1 [Source:HGNC Symbol;Acc:29841]

Location

About this transcript

This transcript has 2 exons, is associated with 3651 variant alleles and maps to 213 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq	Flags
ENST00000378485.1	CLLU1-003	3897	121aa	ENSP00000367746.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5K131	NM_001025233.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000472839.2	CLLU1-002	2817	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-
ENST00000512817.1	CLLU1-001	2274	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-
ENST00000586526.1	CLLU1-005	2422	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000589406.1	CLLU1-004	2419	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 3,897 bps, Translation length: 121 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5K131

Version

ENST00000378485.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000366643 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.