Transcript: ENST00000537239.2 RP11-613M10.8-001

Description

Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:H3BUX3]

Location

About this transcript

This transcript has 3 exons, is annotated with 2 domains and features, is associated with 20998 variant alleles and maps to 227 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq	Flags
ENST00000537239.2	RP11-613M10.8-001	717	64aa	ENSP00000457849.1	Nonsense mediated decay	H3BUX3	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000544475.1	RP11-613M10.8-002	2999	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-
ENST00000541804.1	RP11-613M10.8-003	1514	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 717 bps, Translation length: 64 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000537239.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000401677 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.