Transcript: ENST00000598614.1 SIGLEC12-004

Description

sialic acid binding Ig-like lectin 12 (gene/pseudogene) [Source:HGNC Symbol;Acc:15482]

Gene Synonyms

S2V, SIGLECL1, SLG, Siglec-12, Siglec-L1, Siglec-XII

Location

About this transcript

This transcript has 7 exons, is annotated with 22 domains and features, is associated with 5121 variant alleles and maps to 263 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000291707.3	SIGLEC12-001	2121	595aa	ENSP00000291707.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12833	Q96PQ1	NM_053003.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000598614.1	SIGLEC12-004	1434	477aa	ENSP00000472873.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS59416	Q96PQ1	NM_033329.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000596742.1	SIGLEC12-003	1791	154aa	ENSP00000469791.1	Nonsense mediated decay		M0QYF3	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 1,434 bps, Translation length: 477 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96PQ1

CCDS

This transcript is a member of the Human CCDS set: CCDS59416

Version

ENST00000598614.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000464662 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.