Transcript: ENST00000527616.1 HSPB2-C11orf52-002

Description

HSPB2-C11orf52 readthrough (NMD candidate) [Source:HGNC Symbol;Acc:41996]

Gene Synonyms

HSP27, Hs.78846, LOH11CR1K, MKBP

Location

About this transcript

This transcript has 3 exons, is annotated with 13 domains and features, is associated with 2679 variant alleles and maps to 326 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000527616.1	HSPB2-C11orf52-002	892	182aa	ENSP00000457706.1	Nonsense mediated decay	CCDS8352	A8KAH6 Q16082	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENST00000534100.1	HSPB2-C11orf52-001	1521	52aa	ENSP00000455839.1	Nonsense mediated decay		E9PN16	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 892 bps, Translation length: 182 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q16082

CCDS

This transcript is a member of the Human CCDS set: CCDS8352

Version

ENST00000527616.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000391670 (version 1)