Transcript: ENST00000587808.1 PRODH2-008

Description

proline dehydrogenase (oxidase) 2 [Source:HGNC Symbol;Acc:17325]

Gene Synonyms

HSPOX1

Location

Chromosome 19: 36,290,890-36,293,372 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 1236 variant alleles and maps to 196 oligo probes.

Gene

This transcript is a product of gene ENSG00000250799.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000301175.3	PRODH2-001	1677	536aa	ENSP00000301175.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12478	Q9UF12	NM_021232.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000589835.1	PRODH2-006	612	73aa	ENSP00000474199.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		S4R3D8	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000588266.2	PRODH2-007	567	119aa	ENSP00000465214.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000587695.1	PRODH2-003	1956	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000591694.1	PRODH2-004	728	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000587808.1	PRODH2-008	515	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 515 bps,

Version

ENST00000587808.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000459130 (version 1)

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Transcript: ENST00000587808.1 PRODH2-008

Summary