Transcript: ENST00000405106.2 JMJD7-016

Description

jumonji domain containing 7 [Source:HGNC Symbol;Acc:34397]

Location

Chromosome 15: 42,120,311-42,127,002 forward strand.

About this transcript

This transcript has 3 exons, is associated with 3768 variant alleles and maps to 159 oligo probes.

Gene

This transcript is a product of gene ENSG00000243789.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000397299.4	JMJD7-004	1416	316aa	ENSP00000380467.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45240	B5MC20 C9K0I3 P0C870	NM_001114632.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000408047.1	JMJD7-005	1192	217aa	ENSP00000384174.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B5MC20 C9K0I3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000431823.1	JMJD7-012	828	135aa	ENSP00000399600.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9K0I3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000405106.2	JMJD7-016	330	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000562035.1	JMJD7-014	265	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000478178.1	JMJD7-013	524	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 330 bps,

Version

ENST00000405106.2

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000438204 (version 1)

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Transcript: ENST00000405106.2 JMJD7-016

Summary