Transcript: ENST00000441491.1 GET4-003

Description

golgi to ER traffic protein 4 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:21690]

Gene Synonyms

C7orf20, CEE, CGI-20, H_NH1244M04.5, TRC35

Location

Chromosome 7: 923,661-927,156 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 4 domains and features, is associated with 2322 variant alleles and maps to 93 oligo probes.

Gene

This transcript is a product of gene ENSG00000239857.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000265857.3	GET4-001	2090	327aa	ENSP00000265857.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5317	C9JPA8 Q7L5D6	NM_015949.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000407192.1	GET4-002	4356	274aa	ENSP00000385646.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JPA8 Q7L5D6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000412734.2	GET4-006	873	148aa	ENSP00000414097.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JPA8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000441491.1	GET4-003	682	167aa	ENSP00000390288.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JHN8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000426056.1	GET4-004	502	158aa	ENSP00000407113.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JY46	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000464468.1	GET4-005	676	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000483469.1	GET4-007	370	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 682 bps, Translation length: 167 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000441491.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000322683 (version 7)

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Transcript: ENST00000441491.1 GET4-003

Summary