Transcript: ENST00000482916.1 SHISA9-003

Description

shisa family member 9 [Source:HGNC Symbol;Acc:37231]

Gene Synonyms

CKAMP44

Location

Chromosome 16: 12,996,736-13,002,767 forward strand.

About this transcript

This transcript has 2 exons, is associated with 3292 variant alleles and maps to 56 oligo probes.

Gene

This transcript is a product of gene ENSG00000237515.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000424107.3	SHISA9-001	2020	424aa	ENSP00000407958.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45417	B4DS77	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000558583.1	SHISA9-202	6726	465aa	ENSP00000454014.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YNH4	NM_001145204.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000558318.1	SHISA9-201	4180	262aa	ENSP00000453410.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YM01	NM_001145205.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000423335.2	SHISA9-002	4043	221aa	ENSP00000395245.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45418	B4DS77	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000482916.1	SHISA9-003	556	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000566106.1	SHISA9-005	555	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 556 bps,

Version

ENST00000482916.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000334572 (version 1)

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Transcript: ENST00000482916.1 SHISA9-003

Summary