Transcript: ENST00000596048.1 CERS1-004

Description

ceramide synthase 1 [Source:HGNC Symbol;Acc:14253]

Gene Synonyms

DORV, DTGA3, LAG1, LASS1, RAI, UOG1

Location

About this transcript

This transcript has 5 exons, is annotated with 10 domains and features, is associated with 3120 variant alleles and maps to 191 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000427170.2	CERS1-201	2558	350aa	ENSP00000402697.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46020	P27544 Q5XG75	NM_021267.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000429504.2	CERS1-002	2094	337aa	ENSP00000389044.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46021	P27544 Q5XG75	NM_198207.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000542296.2	CERS1-001	1947	239aa	ENSP00000437648.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5XG75	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000596048.1	CERS1-004	749	216aa	ENSP00000471428.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 749 bps, Translation length: 216 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000596048.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000464797 (version 1)