Transcript: ENST00000408938.2 FAM200A-002

Description

family with sequence similarity 200, member A [Source:HGNC Symbol;Acc:25401]

Gene Synonyms

C7orf38, DKFZp727G131, FLJ36794

Location

About this transcript

This transcript has 2 exons, is annotated with 8 domains and features, is associated with 5734 variant alleles and maps to 258 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000449309.1	FAM200A-001	2480	573aa	ENSP00000411372.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5668	J3QT35 Q8TCP9	NM_145111.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000408938.2	FAM200A-002	1943	535aa	ENSP00000386191.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QT35	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 1,943 bps, Translation length: 535 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000408938.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000345468 (version 1)