Transcript: ENST00000439551.1 LINC00998-004

Description

long intergenic non-protein coding RNA 998 [Source:HGNC Symbol;Acc:48953]

Location

About this transcript

This transcript has 2 exons, is annotated with 2 domains and features, is associated with 517 variant alleles and maps to 290 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq	Flags
ENST00000397764.3	LINC00998-001	1070	59aa	ENSP00000380871.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4D0T7 C9IZ59	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000441359.1	LINC00998-002	962	59aa	ENSP00000405021.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4D0T7 C9IZ59	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000413744.1	LINC00998-003	818	59aa	ENSP00000410731.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4D0T7 C9IZ59	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000439551.1	LINC00998-004	706	32aa	ENSP00000399086.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C9IZ59	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 706 bps, Translation length: 32 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000439551.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000337091 (version 1)