Transcript: ENST00000418063.2 ZNF90-001

Description

zinc finger protein 90 [Source:HGNC Symbol;Acc:13165]

Gene Synonyms

HTF9

Location

About this transcript

This transcript has 4 exons, is annotated with 88 domains and features, is associated with 21706 variant alleles and maps to 368 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000418063.2	ZNF90-001	2310	601aa	ENSP00000410466.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46028	Q03938	NM_007138.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000469078.1	ZNF90-002	1918	112aa	ENSP00000420111.1	Nonsense mediated decay		F8WDJ7	-	-
ENST00000473524.1	ZNF90-005	756	76aa	ENSP00000418166.1	Nonsense mediated decay		F8WBQ5	-	-
ENST00000474284.1	ZNF90-003	1724	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000492328.1	ZNF90-004	632	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000484032.1	ZNF90-006	661	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 2,310 bps, Translation length: 601 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q03938

CCDS

This transcript is a member of the Human CCDS set: CCDS46028

Version

ENST00000418063.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000350101 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.