Transcript: ENST00000427786.1 PPP1CB-008

Description

protein phosphatase 1, catalytic subunit, beta isozyme [Source:HGNC Symbol;Acc:9282]

Gene Synonyms

HEL-S-80p, PP-1B, PP1B, PP1beta, PPP1CD

Location

Chromosome 2: 28,974,612-29,001,797 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 4 domains and features, is associated with 12799 variant alleles and maps to 135 oligo probes.

Gene

This transcript is a product of gene ENSG00000213639.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000395366.2	PPP1CB-001	4893	327aa	ENSP00000378769.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33169	B4DJ75 C4TNW5 C9J9S3 C9JP48 E7ETD8 P62140	NM_002709.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000358506.2	PPP1CB-201	4771	327aa	ENSP00000351298.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33169	B4DJ75 C4TNW5 C9J9S3 C9JP48 E7ETD8 P62140	NM_206876.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000296122.6	PPP1CB-003	3527	327aa	ENSP00000296122.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33169	B4DJ75 C4TNW5 C9J9S3 C9JP48 E7ETD8 P62140	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000455580.1	PPP1CB-004	721	169aa	ENSP00000390715.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C4TNW5 E7ETD8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000441461.1	PPP1CB-005	584	138aa	ENSP00000414918.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J9S3 C9JP48	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000420282.1	PPP1CB-006	570	125aa	ENSP00000398839.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J9S3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000418910.1	PPP1CB-009	281	82aa	ENSP00000388056.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C4TNW5 H0Y3Y6	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000427786.1	PPP1CB-008	569	64aa	ENSP00000394589.1	Nonsense mediated decay		F8WE71	-	-
ENST00000464273.1	PPP1CB-007	577	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 2, Transcript length: 569 bps, Translation length: 64 residues

Version

ENST00000427786.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000324848 (version 1)

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Transcript: ENST00000427786.1 PPP1CB-008

Summary