Transcript: ENST00000492211.1 ARHGAP19-004

Description

Rho GTPase activating protein 19 [Source:HGNC Symbol;Acc:23724]

Gene Synonyms

FLJ00194, MGC14258

Location

Chromosome 10: 98,981,930-99,052,380 reverse strand.

About this transcript

This transcript has 13 exons, is annotated with 8 domains and features, is associated with 31081 variant alleles and maps to 817 oligo probes.

Gene

This transcript is a product of gene ENSG00000213390.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000358531.4	ARHGAP19-003	5463	494aa	ENSP00000351333.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7454	Q14CB8 Q8NA01	NM_032900.5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000371027.1	ARHGAP19-002	2301	485aa	ENSP00000360066.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58092	Q14CB8 Q8NA01	NM_001256423.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000355366.5	ARHGAP19-201	1488	485aa	ENSP00000347526.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C5Z9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000466484.1	ARHGAP19-006	601	197aa	ENSP00000473667.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		R4GNI4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000492211.1	ARHGAP19-004	5525	300aa	ENSP00000473327.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000487035.1	ARHGAP19-005	4553	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000493068.2	ARHGAP19-007	812	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 13, Coding exons: 6, Transcript length: 5,525 bps, Translation length: 300 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000492211.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000049648 (version 2)

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Transcript: ENST00000492211.1 ARHGAP19-004

Summary