Transcript: ENST00000438346.1 TSGA13-004

Description

testis specific, 13 [Source:HGNC Symbol;Acc:12369]

Location

About this transcript

This transcript has 5 exons, is annotated with 1 domain and feature, is associated with 2218 variant alleles and maps to 123 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000456951.1	TSGA13-001	2046	275aa	ENSP00000406047.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5824	C9JIG7 C9JVS7 Q96PP4	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000356588.3	TSGA13-002	1372	275aa	ENSP00000348996.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5824	C9JIG7 C9JVS7 Q96PP4	NM_052933.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000438346.1	TSGA13-004	567	58aa	ENSP00000407352.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JVS7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000443954.1	TSGA13-005	548	76aa	ENSP00000415856.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JIG7 C9JVS7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 3, Transcript length: 567 bps, Translation length: 58 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000438346.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000338000 (version 37)