Transcript: ENST00000541784.1 SLCO1B7-002

Description

solute carrier organic anion transporter family, member 1B7 (non-functional) [Source:HGNC Symbol;Acc:32934]

Gene Synonyms

LST-3, LST-3TM12, LST3, LST3TM12, SLC21A21

Location

About this transcript

This transcript has 2 exons, is associated with 3655 variant alleles and maps to 67 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000421593.2	SLCO1B7-001	1923	640aa	ENSP00000394168.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44843	G3V0H7	NM_001009562.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000554957.1	SLCO1B7-201	2064	687aa	ENSP00000452013.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H094	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000545916.1	SLCO1B7-003	506	99aa	ENSP00000439857.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YFQ8	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000541784.1	SLCO1B7-002	558	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 558 bps,

Version

ENST00000541784.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000402068 (version 1)