Transcript: ENST00000560102.1 EXOC3L4-006

Description

exocyst complex component 3-like 4 [Source:HGNC Symbol;Acc:20120]

Gene Synonyms

C14orf73, RP11-736N17.8

Location

Chromosome 14: 103,569,889-103,570,665 forward strand.

About this transcript

This transcript has 2 exons, is associated with 573 variant alleles and maps to 102 oligo probes.

Gene

This transcript is a product of gene ENSG00000205436.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000380069.3	EXOC3L4-001	2293	722aa	ENSP00000369409.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32163	Q17RC7	NM_001077594.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000560304.1	EXOC3L4-007	657	212aa	ENSP00000454036.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000559116.1	EXOC3L4-005	460	153aa	ENSP00000454163.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YNV0	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000559661.1	EXOC3L4-003	665	15aa	ENSP00000454174.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000560925.1	EXOC3L4-002	2341	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000559693.1	EXOC3L4-004	813	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000560102.1	EXOC3L4-006	563	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 563 bps,

Version

ENST00000560102.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000415666 (version 1)

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Transcript: ENST00000560102.1 EXOC3L4-006

Summary