Transcript: ENST00000586080.1 R3HDM4-008

Description

R3H domain containing 4 [Source:HGNC Symbol;Acc:28270]

Gene Synonyms

C19orf22, MGC16353

Location

Chromosome 19: 899,644-901,236 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 1112 variant alleles and maps to 123 oligo probes.

Gene

This transcript is a product of gene ENSG00000198858.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000361574.5	R3HDM4-001	1815	268aa	ENSP00000355385.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12048	Q96D70	NM_138774.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000587975.1	R3HDM4-003	1710	247aa	ENSP00000464744.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EIG9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000589428.1	R3HDM4-002	1653	97aa	ENSP00000466823.1	Nonsense mediated decay		K7EN78	-	-
ENST00000590454.1	R3HDM4-004	1014	45aa	ENSP00000468026.1	Nonsense mediated decay		K7ER32	-	-
ENST00000590259.1	R3HDM4-005	830	45aa	ENSP00000468088.1	Nonsense mediated decay		K7ER32	-	-
ENST00000591829.1	R3HDM4-006	724	35aa	ENSP00000466124.1	Nonsense mediated decay		K7ELK7	-	-
ENST00000589445.1	R3HDM4-007	705	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000586080.1	R3HDM4-008	537	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 537 bps,

Version

ENST00000586080.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000458212 (version 1)

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Transcript: ENST00000586080.1 R3HDM4-008

Summary