Transcript: ENST00000510609.1 FAM169A-002

Description

family with sequence similarity 169, member A [Source:HGNC Symbol;Acc:29138]

Gene Synonyms

KIAA0888, SLAP75

Location

Chromosome 5: 74,073,401-74,162,169 reverse strand.

About this transcript

This transcript has 12 exons, is annotated with 2 domains and features, is associated with 38874 variant alleles and maps to 594 oligo probes.

Gene

This transcript is a product of gene ENSG00000198780.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000389156.4	FAM169A-001	5990	670aa	ENSP00000373808.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43330	D6R953 D6RC41 D6RFI5 Q9Y6X4	NM_015566.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000510496.1	FAM169A-004	5810	610aa	ENSP00000424578.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RB01 D6RFI5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000380515.3	FAM169A-201	2261	127aa	ENSP00000369886.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RFI5 Q9Y6X4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000513277.1	FAM169A-005	803	222aa	ENSP00000423631.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6R953 D6RC41 D6RFI5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000514200.1	FAM169A-006	751	175aa	ENSP00000423883.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RC41 D6RFI5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000506954.1	FAM169A-007	571	86aa	ENSP00000421451.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RFI5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000514215.1	FAM169A-003	5954	127aa	ENSP00000425319.1	Nonsense mediated decay		D6RFI5 Q9Y6X4	-	-
ENST00000510609.1	FAM169A-002	5908	127aa	ENSP00000423905.1	Nonsense mediated decay		D6RFI5 Q9Y6X4	-	-

Summary

Statistics

Exons: 12, Coding exons: 4, Transcript length: 5,908 bps, Translation length: 127 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9Y6X4

Version

ENST00000510609.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000371102 (version 2)

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Transcript: ENST00000510609.1 FAM169A-002

Summary