Transcript: ENST00000356408.3 CARD11-012

Description

caspase recruitment domain family, member 11 [Source:HGNC Symbol;Acc:16393]

Gene Synonyms

BENTA, BIMP3, CARMA1, IMD11, PPBL

Location

About this transcript

This transcript has 4 exons, is annotated with 6 domains and features, is associated with 49561 variant alleles and maps to 104 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000396946.4	CARD11-011	4366	1154aa	ENSP00000380150.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5336	E2QRC0 Q8TES3 Q9BXL7	NM_032415.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000355508.3	CARD11-013	815	271aa	ENSP00000347695.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7BY05	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000356408.3	CARD11-012	584	73aa	ENSP00000348779.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E2QRC0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000480332.1	CARD11-014	841	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 2, Transcript length: 584 bps, Translation length: 73 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000356408.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000325288 (version 1)