Transcript: ENST00000543765.1 CLEC4C-005

Description

C-type lectin domain family 4, member C [Source:HGNC Symbol;Acc:13258]

Gene Synonyms

BDCA2, CD303, CLECSF11, CLECSF7, DLEC, HECL, PRO34150

Location

Chromosome 12: 7,882,300-7,899,935 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 8 domains and features, is associated with 8340 variant alleles and maps to 297 oligo probes.

Gene

This transcript is a product of gene ENSG00000198178.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000542353.1	CLEC4C-001	1314	213aa	ENSP00000440428.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8583	H0YFH6 Q8WTT0	NM_130441.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000540085.1	CLEC4C-201	1221	182aa	ENSP00000445338.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8584	H0YFH6 Q8WTT0	NM_203503.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000354629.5	CLEC4C-004	1126	182aa	ENSP00000346648.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8584	H0YFH6 Q8WTT0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000360345.3	CLEC4C-003	970	213aa	ENSP00000353500.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8583	H0YFH6 Q8WTT0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000537530.1	CLEC4C-006	577	88aa	ENSP00000438649.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YFH6	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000543765.1	CLEC4C-005	414	138aa	ENSP00000442457.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YFH6 H0YGB2	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 414 bps, Translation length: 138 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENST00000543765.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000399754 (version 1)

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Transcript: ENST00000543765.1 CLEC4C-005

Summary