Transcript: ENST00000531280.1 PCNXL3-005

Description

pecanex-like 3 (Drosophila) [Source:HGNC Symbol;Acc:18760]

Gene Synonyms

FLJ22427

Location

About this transcript

This transcript has 2 exons, is associated with 1850 variant alleles and maps to 106 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000355703.3	PCNXL3-001	7105	2034aa	ENSP00000347931.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44650	Q9H6A9	NM_032223.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000531280.1	PCNXL3-005	472	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000531045.1	PCNXL3-004	266	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000439247.2	PCNXL3-003	3104	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000530174.1	PCNXL3-002	1229	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 472 bps,

Version

ENST00000531280.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000390325 (version 1)