Transcript: ENST00000392908.3 SLC25A29-003

Description

solute carrier family 25 (mitochondrial carnitine/acylcarnitine carrier), member 29 [Source:HGNC Symbol;Acc:20116]

Gene Synonyms

AL157871.2, C14orf69, CACL, FLJ38975, ORNT3

Location

Chromosome 14: 100,757,455-100,772,778 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 2 domains and features, is associated with 7557 variant alleles and maps to 337 oligo probes.

Gene

This transcript is a product of gene ENSG00000197119.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000359232.3	SLC25A29-002	2385	303aa	ENSP00000352167.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32156	A3KMR5 G3V5F4 Q8N8R3	NM_001039355.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000554912.1	SLC25A29-005	5169	237aa	ENSP00000450913.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A3KMR5 G3V5F4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000392908.3	SLC25A29-003	2242	145aa	ENSP00000376640.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V477 Q8N8R3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000539621.1	SLC25A29-201	2242	237aa	ENSP00000442985.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A3KMR5 G3V5F4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000556505.1	SLC25A29-006	1540	237aa	ENSP00000452446.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A3KMR5 G3V5F4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000555927.1	SLC25A29-019	960	237aa	ENSP00000452078.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A3KMR5 G3V5F4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000554060.1	SLC25A29-011	674	138aa	ENSP00000451644.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V477	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000554291.1	SLC25A29-021	569	129aa	ENSP00000452324.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V5F4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000554224.1	SLC25A29-007	1124	35aa	ENSP00000451573.1	Nonsense mediated decay		G3V441	-	-
ENST00000556868.1	SLC25A29-004	1067	122aa	ENSP00000451808.1	Nonsense mediated decay		G3V4H8	-	-
ENST00000556715.2	SLC25A29-010	1025	35aa	ENSP00000451952.1	Nonsense mediated decay		G3V441	-	-
ENST00000556844.1	SLC25A29-013	1050	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000553359.1	SLC25A29-008	797	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000555475.1	SLC25A29-020	675	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000556873.1	SLC25A29-017	569	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000556201.1	SLC25A29-014	563	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000555949.2	SLC25A29-009	550	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000553574.1	SLC25A29-018	323	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000555888.1	SLC25A29-015	756	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000557438.1	SLC25A29-012	534	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000555051.1	SLC25A29-016	371	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 2,242 bps, Translation length: 145 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8N8R3

Version

ENST00000392908.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000317531 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000392908.3 SLC25A29-003

Summary