Transcript: ENST00000343035.2 BSX-001

Description

brain-specific homeobox [Source:HGNC Symbol;Acc:20450]

Gene Synonyms

BSX1

Location

About this transcript

This transcript has 3 exons, is annotated with 12 domains and features, is associated with 2445 variant alleles and maps to 218 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000343035.2	BSX-001	830	233aa	ENSP00000344285.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41728	Q3C1V8	NM_001098169.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 830 bps, Translation length: 233 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q3C1V8

CCDS

This transcript is a member of the Human CCDS set: CCDS41728

Version

ENST00000343035.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000317076 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.