Transcript: ENST00000483950.1 CHM-003

Description

choroideremia (Rab escort protein 1) [Source:HGNC Symbol;Acc:1940]

Gene Synonyms

DXS540, GGTA, HSD-32, REP-1, REP1, TCD

Location

Chromosome X: 85,281,962-85,302,565 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 6254 variant alleles and maps to 70 oligo probes.

Gene

This transcript is a product of gene ENSG00000188419.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000357749.2	CHM-001	5442	653aa	ENSP00000350386.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14454	B4DRL9 P24386	NM_000390.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000358786.4	CHM-002	2820	110aa	ENSP00000362228.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS48139	P24386	NM_001145414.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000537751.1	CHM-201	2000	505aa	ENSP00000441728.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DRL9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000467744.2	CHM-004	2040	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000483950.1	CHM-003	678	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000487515.1	CHM-005	309	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 678 bps,

Version

ENST00000483950.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000057398 (version 1)

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Transcript: ENST00000483950.1 CHM-003

Summary