Transcript: ENST00000482505.1 PEAR1-003

Description

platelet endothelial aggregation receptor 1 [Source:HGNC Symbol;Acc:33631]

Gene Synonyms

FLJ00193, JEDI, MEGF12

Location

Chromosome 1: 156,879,749-156,880,365 forward strand.

About this transcript

This transcript has 2 exons, is associated with 365 variant alleles and maps to 102 oligo probes.

Gene

This transcript is a product of gene ENSG00000187800.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000338302.3	PEAR1-001	4970	1037aa	ENSP00000344465.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS30892	A6PVP2 Q5VY43	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000292357.7	PEAR1-201	4866	1037aa	ENSP00000292357.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS30892	A6PVP2 Q5VY43	NM_001080471.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000455314.1	PEAR1-007	642	173aa	ENSP00000389742.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6PVP2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000444016.1	PEAR1-005	688	77aa	ENSP00000397870.1	Nonsense mediated decay		F2Z2F7	-	-
ENST00000469390.1	PEAR1-002	4470	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000465101.1	PEAR1-004	980	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000482505.1	PEAR1-003	492	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 492 bps,

Version

ENST00000482505.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000098939 (version 1)

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Transcript: ENST00000482505.1 PEAR1-003

Summary