Transcript: ENST00000585846.1 CYP4F3-005

Description

cytochrome P450, family 4, subfamily F, polypeptide 3 [Source:HGNC Symbol;Acc:2646]

Gene Synonyms

CPF3, CYP4F, LTB4H

Location

Chromosome 19: 15,752,119-15,770,581 forward strand.

About this transcript

This transcript has 12 exons, is annotated with 17 domains and features, is associated with 10923 variant alleles and maps to 590 oligo probes.

Gene

This transcript is a product of gene ENSG00000186529.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000221307.8	CYP4F3-001	5050	520aa	ENSP00000221307.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12332	B7Z5A8 Q08477	NM_000896.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000591058.1	CYP4F3-002	2983	520aa	ENSP00000466988.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS59362	Q08477	NM_001199208.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000586182.2	CYP4F3-004	2338	520aa	ENSP00000466395.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS59362	Q08477	NM_001199209.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000585846.1	CYP4F3-005	2056	520aa	ENSP00000468105.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS59362	Q08477	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000592424.1	CYP4F3-007	561	74aa	ENSP00000476546.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000587360.1	CYP4F3-006	559	79aa	ENSP00000465394.1	Nonsense mediated decay		K7EJZ8	-	-
ENST00000588886.2	CYP4F3-008	375	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000592279.2	CYP4F3-003	2078	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000609670.1	CYP4F3-009	337	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 2,056 bps, Translation length: 520 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q08477

CCDS

This transcript is a member of the Human CCDS set: CCDS59362

Version

ENST00000585846.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000460913 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000585846.1 CYP4F3-005

Summary