Transcript: ENST00000592710.1 CYP4F2-006

Description

cytochrome P450, family 4, subfamily F, polypeptide 2 [Source:HGNC Symbol;Acc:2645]

Gene Synonyms

CPF2

Location

Chromosome 19: 15,990,447-15,997,311 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 3162 variant alleles and maps to 246 oligo probes.

Gene

This transcript is a product of gene ENSG00000186115.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000221700.6	CYP4F2-001	2407	520aa	ENSP00000221700.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12336	K7EK90 P78329	NM_001082.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000011989.7	CYP4F2-201	951	190aa	ENSP00000011989.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DV75	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000586927.1	CYP4F2-005	579	153aa	ENSP00000465514.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EK90	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000589654.2	CYP4F2-007	499	74aa	ENSP00000467846.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000587671.2	CYP4F2-004	954	89aa	ENSP00000467443.2	Nonsense mediated decay		-	-	-
ENST00000392846.3	CYP4F2-002	2254	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000592710.1	CYP4F2-006	744	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000608168.1	CYP4F2-003	593	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 744 bps,

Version

ENST00000592710.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000460376 (version 1)

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Transcript: ENST00000592710.1 CYP4F2-006

Summary