Transcript: ENST00000221700.6 CYP4F2-001

Description

cytochrome P450, family 4, subfamily F, polypeptide 2 [Source:HGNC Symbol;Acc:2645]

Gene Synonyms

CPF2

Location

Chromosome 19: 15,988,833-16,008,930 reverse strand.

About this transcript

This transcript has 13 exons, is annotated with 18 domains and features, is associated with 9722 variant alleles and maps to 743 oligo probes.

Gene

This transcript is a product of gene ENSG00000186115.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000221700.6	CYP4F2-001	2407	520aa	ENSP00000221700.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12336	K7EK90 P78329	NM_001082.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000011989.7	CYP4F2-201	951	190aa	ENSP00000011989.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DV75	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000586927.1	CYP4F2-005	579	153aa	ENSP00000465514.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EK90	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000589654.2	CYP4F2-007	499	74aa	ENSP00000467846.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000587671.2	CYP4F2-004	954	89aa	ENSP00000467443.2	Nonsense mediated decay		-	-	-
ENST00000392846.3	CYP4F2-002	2254	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000592710.1	CYP4F2-006	744	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000608168.1	CYP4F2-003	593	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 13, Coding exons: 12, Transcript length: 2,407 bps, Translation length: 520 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P78329

CCDS

This transcript is a member of the Human CCDS set: CCDS12336

Version

ENST00000221700.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000460372 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000221700.6 CYP4F2-001

Summary