Transcript: ENST00000553727.1 SV2B-005

Description

synaptic vesicle glycoprotein 2B [Source:HGNC Symbol;Acc:16874]

Gene Synonyms

HsT19680, KIAA0735

Location

Chromosome 15: 91,801,707-91,810,178 forward strand.

About this transcript

This transcript has 3 exons, is associated with 3878 variant alleles and maps to 82 oligo probes.

Gene

This transcript is a product of gene ENSG00000185518.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000394232.1	SV2B-001	11279	683aa	ENSP00000377779.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10370	Q7L1I2	NM_014848.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000330276.4	SV2B-201	11202	683aa	ENSP00000332818.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10370	Q7L1I2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000545111.2	SV2B-002	2099	532aa	ENSP00000443243.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53972	Q7L1I2	NM_001167580.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000557410.1	SV2B-003	4077	683aa	ENSP00000450992.1	Nonsense mediated decay	CCDS10370	Q7L1I2	-	-
ENST00000557291.1	SV2B-004	601	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000553727.1	SV2B-005	535	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 535 bps,

Version

ENST00000553727.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000414795 (version 1)

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Transcript: ENST00000553727.1 SV2B-005

Summary