Transcript: ENST00000534943.1 ATP6V0A2-006

Description

ATPase, H+ transporting, lysosomal V0 subunit a2 [Source:HGNC Symbol;Acc:18481]

Gene Synonyms

A2, ARCL, ARCL2A, ATP6A2, ATP6N1D, ATP6a2, J6B7, RTF, STV1, Stv1, TJ6, TJ6M, TJ6S, TJ6s, VPH1, Vph1, WSS, a2

Location

Chromosome 12: 124,234,543-124,242,562 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 5 domains and features, is associated with 3493 variant alleles and maps to 202 oligo probes.

Gene

This transcript is a product of gene ENSG00000185344.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000330342.3	ATP6V0A2-001	6542	856aa	ENSP00000332247.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9254	B4DQF7 F5H5F3 F5H847 Q9Y487	NM_012463.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000504192.2	ATP6V0A2-003	2525	328aa	ENSP00000443441.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H5F3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000534943.1	ATP6V0A2-006	1733	131aa	ENSP00000443726.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H847	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000544833.1	ATP6V0A2-007	1013	138aa	ENSP00000441143.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GX48	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000543687.1	ATP6V0A2-008	1421	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000536426.1	ATP6V0A2-005	742	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000545059.1	ATP6V0A2-004	4232	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000540368.1	ATP6V0A2-002	1479	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 1,733 bps, Translation length: 131 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000534943.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000400770 (version 1)

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Transcript: ENST00000534943.1 ATP6V0A2-006

Summary