Transcript: ENST00000399815.2 IFITM2-004

Description

interferon induced transmembrane protein 2 [Source:HGNC Symbol;Acc:5413]

Gene Synonyms

1-8D, DSPA2c

Location

Chromosome 11: 308,408-315,272 forward strand.

About this transcript

This transcript has 2 exons, is annotated with 4 domains and features, is associated with 3221 variant alleles and maps to 458 oligo probes.

Gene

This transcript is a product of gene ENSG00000185201.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000399817.4	IFITM2-001	659	132aa	ENSP00000382714.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41583	E9PQN9 Q01629	NM_006435.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000602569.1	IFITM2-005	605	112aa	ENSP00000473587.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PQN9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000533141.1	IFITM2-003	588	112aa	ENSP00000434443.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PQN9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000399815.2	IFITM2-004	382	74aa	ENSP00000382712.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000527146.1	IFITM2-002	634	55aa	ENSP00000431850.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 382 bps, Translation length: 74 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000399815.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000383593 (version 2)

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Transcript: ENST00000399815.2 IFITM2-004

Summary