Transcript: ENST00000505529.1 SORCS2-003

Description

sortilin-related VPS10 domain containing receptor 2 [Source:HGNC Symbol;Acc:16698]

Gene Synonyms

KIAA1329

Location

About this transcript

This transcript has 3 exons, is annotated with 3 domains and features, is associated with 3727 variant alleles and maps to 129 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000507866.2	SORCS2-001	6152	1159aa	ENSP00000422185.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47008	Q96PQ0	NM_020777.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000329016.9	SORCS2-201	3542	1002aa	ENSP00000329124.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B5MED8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000505529.1	SORCS2-003	762	101aa	ENSP00000424194.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0Y9I2	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000511199.1	SORCS2-002	532	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 762 bps, Translation length: 101 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000505529.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000358858 (version 1)