Transcript: ENST00000379077.3 WT1-005

Description

Wilms tumor 1 [Source:HGNC Symbol;Acc:12796]

Gene Synonyms

AWT1, EWS-WT1, GUD, NPHS4, WAGR, WIT-2, WT33

Location

Chromosome 11: 32,409,321-32,456,933 reverse strand.

About this transcript

This transcript has 10 exons, is annotated with 9 domains and features, is associated with 25310 variant alleles and maps to 622 oligo probes.

Gene

This transcript is a product of gene ENSG00000184937.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000332351.3	WT1-001	3122	517aa	ENSP00000331327.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7878	A0FJ57 A0FJ58 A8MN20 E9PKS2 E9PPW3 H0Y3F0 J3KNN9 Q6LBI3	NM_024426.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000452863.3	WT1-004	2768	497aa	ENSP00000415516.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44561	A0FJ57 A8MN20 E9PPW3 H0Y3F0	NM_000378.4	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000379079.2	WT1-002	2466	302aa	ENSP00000368370.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55751	A0FJ57 A8MN20 E9PKS2 E9PPW3 P19544	NM_001198551.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000530998.1	WT1-003	2421	288aa	ENSP00000435307.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55750	A0FJ57 A0FJ58 A8MN20 E9PPW3 P19544 Q6LBI3	NM_001198552.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000448076.3	WT1-009	2114	514aa	ENSP00000413452.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44562	A0FJ57 A8MN20 E9PKS2 E9PPW3 H0Y3F0 H0Y7K5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000526685.1	WT1-007	718	25aa	ENSP00000436292.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PPW3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000527775.1	WT1-006	578	131aa	ENSP00000435351.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A8MN20 E9PKS2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000527882.1	WT1-008	551	178aa	ENSP00000435624.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0FJ58 A8MN20 E9PPW3 Q6LBI3	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000379077.3	WT1-005	3032	317aa	ENSP00000368368.3	Nonsense mediated decay		H0Y3F0 Q6PI38	-	-

Summary

Statistics

Exons: 10, Coding exons: 4, Transcript length: 3,032 bps, Translation length: 317 residues

Version

ENST00000379077.3

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000388757 (version 1)

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Transcript: ENST00000379077.3 WT1-005

Summary