Transcript: ENST00000518641.1 PRSS55-002

Description

protease, serine, 55 [Source:HGNC Symbol;Acc:30824]

Gene Synonyms

T-SP1, TSP1, UNQ9391

Location

About this transcript

This transcript has 5 exons, is annotated with 12 domains and features, is associated with 11152 variant alleles and maps to 194 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000328655.3	PRSS55-001	1124	352aa	ENSP00000333003.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5976	Q6UWB4	NM_198464.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000522210.1	PRSS55-003	1005	276aa	ENSP00000430459.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56523	Q6UWB4	NM_001197020.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000518641.1	PRSS55-002	2374	182aa	ENSP00000429376.1	Nonsense mediated decay		Q6P2N5	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 2, Transcript length: 2,374 bps, Translation length: 182 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000518641.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000375672 (version 1)