Transcript: ENST00000485173.1 MAP7D2-002

Description

MAP7 domain containing 2 [Source:HGNC Symbol;Acc:25899]

Gene Synonyms

FLJ14503

Location

Chromosome X: 20,025,227-20,082,856 reverse strand.

About this transcript

This transcript has 12 exons, is annotated with 4 domains and features, is associated with 17258 variant alleles and maps to 410 oligo probes.

Gene

This transcript is a product of gene ENSG00000184368.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000379643.5	MAP7D2-003	3918	773aa	ENSP00000368964.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55386	Q96T17	NM_001168465.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000379651.3	MAP7D2-001	3930	732aa	ENSP00000368972.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14195	Q96T17	NM_152780.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000543767.1	MAP7D2-201	3409	617aa	ENSP00000440691.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GYC2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000443379.3	MAP7D2-008	2476	687aa	ENSP00000388239.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55385	Q96T17	NM_001168466.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000452324.3	MAP7D2-006	2233	680aa	ENSP00000413301.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55384	Q96T17	NM_001168467.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000485173.1	MAP7D2-002	2188	169aa	ENSP00000450876.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000466145.1	MAP7D2-004	598	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 6, Transcript length: 2,188 bps, Translation length: 169 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000485173.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000056002 (version 2)

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000485173.1 MAP7D2-002

Summary