Transcript: ENST00000561338.1 ALDH1A3-007

Description

aldehyde dehydrogenase 1 family, member A3 [Source:HGNC Symbol;Acc:409]

Gene Synonyms

ALDH1A6, ALDH6, MCOP8, RALDH3

Location

Chromosome 15: 101,417,919-101,433,192 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 5 domains and features, is associated with 7035 variant alleles and maps to 105 oligo probes.

Gene

This transcript is a product of gene ENSG00000184254.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000329841.5	ALDH1A3-001	3924	512aa	ENSP00000332256.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10389	P47895	NM_000693.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000346623.6	ALDH1A3-004	3104	405aa	ENSP00000343294.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0Y2X5 Q7Z3A2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000557963.1	ALDH1A3-006	1670	102aa	ENSP00000453328.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YLT1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000561338.1	ALDH1A3-007	571	144aa	ENSP00000452789.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YKF9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000558033.1	ALDH1A3-008	713	141aa	ENSP00000454107.1	Nonsense mediated decay		H0YNQ3	-	-
ENST00000560555.1	ALDH1A3-003	576	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000558869.1	ALDH1A3-009	586	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 571 bps, Translation length: 144 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000561338.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000416653 (version 2)

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Transcript: ENST00000561338.1 ALDH1A3-007

Summary