Transcript: ENST00000461033.1 PP2D1-003

Description

protein phosphatase 2C-like domain containing 1 [Source:HGNC Symbol;Acc:28406]

Gene Synonyms

C3orf48, FLJ25449

Location

About this transcript

This transcript has 2 exons, is associated with 4803 variant alleles and maps to 186 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000389050.4	PP2D1-001	2151	630aa	ENSP00000373702.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58817	A8MPX8	NM_001252657.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000333083.7	PP2D1-002	1602	376aa	ENSP00000331295.7	Nonsense mediated decay		A8MPX8 Q2M2Y9	-	-
ENST00000461033.1	PP2D1-003	1330	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 1,330 bps,

Version

ENST00000461033.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000339835 (version 1)