Transcript: ENST00000569628.1 TBL3-003

Description

transducin (beta)-like 3 [Source:HGNC Symbol;Acc:11587]

Gene Synonyms

SAZD, UTP13

Location

Chromosome 16: 2,022,087-2,028,685 forward strand.

About this transcript

This transcript has 21 exons, is associated with 4720 variant alleles and maps to 591 oligo probes.

Gene

This transcript is a product of gene ENSG00000183751.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000568546.1	TBL3-001	6803	808aa	ENSP00000454836.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10453	A0JLS5 Q12788	NM_006453.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000332704.5	TBL3-004	2091	697aa	ENSP00000331815.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000561907.1	TBL3-006	518	77aa	ENSP00000454735.1	Nonsense mediated decay		H3BN88	-	-
ENST00000569628.1	TBL3-003	2594	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000567615.1	TBL3-009	1047	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000564171.1	TBL3-008	917	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000569792.1	TBL3-007	856	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 21, Coding exons: 0, Transcript length: 2,594 bps,

Version

ENST00000569628.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000434033 (version 1)

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Transcript: ENST00000569628.1 TBL3-003

Summary