Transcript: ENST00000332878.4 MACC1-002

Description

metastasis associated in colon cancer 1 [Source:HGNC Symbol;Acc:30215]

Gene Synonyms

7A5, SH3BP4L

Location

Chromosome 7: 20,180,248-20,257,027 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 5 domains and features, is associated with 35802 variant alleles and maps to 210 oligo probes.

Gene

This transcript is a product of gene ENSG00000183742.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000400331.5	MACC1-001	9159	852aa	ENSP00000383185.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5369	Q6ZN28	NM_182762.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000332878.4	MACC1-002	2994	852aa	ENSP00000328410.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5369	Q6ZN28	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000589011.1	MACC1-005	2686	852aa	ENSP00000466864.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5369	Q6ZN28	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000471019.1	MACC1-003	304	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000483317.1	MACC1-004	608	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 2,994 bps, Translation length: 852 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6ZN28

CCDS

This transcript is a member of the Human CCDS set: CCDS5369

Version

ENST00000332878.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000326634 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000332878.4 MACC1-002

Summary