Transcript: ENST00000575796.1 SPNS3-007

Description

spinster homolog 3 (Drosophila) [Source:HGNC Symbol;Acc:28433]

Gene Synonyms

MGC29671

Location

Chromosome 17: 4,388,312-4,391,157 forward strand.

About this transcript

This transcript has 4 exons, is associated with 1548 variant alleles and maps to 179 oligo probes.

Gene

This transcript is a product of gene ENSG00000182557.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000355530.2	SPNS3-001	2133	512aa	ENSP00000347721.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11045	Q6ZMD2	NM_182538.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000333476.2	SPNS3-201	1755	385aa	ENSP00000333207.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6ZMD2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000575194.1	SPNS3-002	1721	202aa	ENSP00000460781.1	Nonsense mediated decay		I3L3W7	-	-
ENST00000576069.1	SPNS3-004	834	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000575796.1	SPNS3-007	531	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000575185.1	SPNS3-006	496	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000572078.1	SPNS3-005	463	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 531 bps,

Version

ENST00000575796.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000438798 (version 1)

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Transcript: ENST00000575796.1 SPNS3-007

Summary