Transcript: ENST00000554696.1 GABRG3-005

Description

gamma-aminobutyric acid (GABA) A receptor, gamma 3 [Source:HGNC Symbol;Acc:4088]

Location

Chromosome 15: 27,516,689-27,772,661 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 17 domains and features, is associated with 114061 variant alleles and maps to 154 oligo probes.

Gene

This transcript is a product of gene ENSG00000182256.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000333743.6	GABRG3-001	2004	467aa	ENSP00000331912.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45195	Q99928	NM_033223.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000555083.1	GABRG3-002	1405	253aa	ENSP00000452244.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS59251	Q99928	NM_001270873.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000554696.1	GABRG3-005	774	258aa	ENSP00000451862.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YJP1	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000451330.2	GABRG3-004	717	169aa	ENSP00000390708.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000557596.1	GABRG3-007	342	38aa	ENSP00000450976.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000554786.1	GABRG3-006	446	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000553440.1	GABRG3-003	615	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 774 bps, Translation length: 258 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENST00000554696.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000415248 (version 1)

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Transcript: ENST00000554696.1 GABRG3-005

Summary