Transcript: ENST00000596768.1 MUC16-003

Description

mucin 16, cell surface associated [Source:HGNC Symbol;Acc:15582]

Gene Synonyms

CA125, FLJ14303

Location

Chromosome 19: 8,959,521-9,002,673 reverse strand.

About this transcript

This transcript has 28 exons, is annotated with 25 domains and features, is associated with 22681 variant alleles and maps to 607 oligo probes.

Gene

This transcript is a product of gene ENSG00000181143.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000397910.4	MUC16-001	43816	14507aa	ENSP00000381008.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54212	B5ME49 F8WE81	NM_024690.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000599436.1	MUC16-004	4079	1330aa	ENSP00000472781.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000380951.5	MUC16-201	3557	1148aa	ENSP00000370338.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8WE81	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000601404.1	MUC16-002	4078	1224aa	ENSP00000470885.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000596768.1	MUC16-003	2888	670aa	ENSP00000472883.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000596956.1	MUC16-005	352	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 28, Coding exons: 21, Transcript length: 2,888 bps, Translation length: 670 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000596768.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000402976 (version 1)

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000596768.1 MUC16-003

Summary