Transcript: ENST00000467561.1 PLD5-003

Description

phospholipase D family, member 5 [Source:HGNC Symbol;Acc:26879]

Gene Synonyms

FLJ40773, PLDC

Location

Chromosome 1: 242,287,720-242,687,973 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 5 domains and features, is associated with 181000 variant alleles and maps to 230 oligo probes.

Gene

This transcript is a product of gene ENSG00000180287.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000536534.2	PLD5-006	8721	536aa	ENSP00000440896.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1621	J3KP61 Q8N7P1	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000442594.2	PLD5-202	2729	444aa	ENSP00000414188.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8N7P1	NM_152666.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000427495.1	PLD5-201	2436	474aa	ENSP00000401285.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55692	F5H329 F8W7H1 Q8N7P1	NM_001195812.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000459864.1	PLD5-004	490	140aa	ENSP00000438191.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H329 F8W7H1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000314833.6	PLD5-001	2830	47aa	ENSP00000314748.6	Nonsense mediated decay		F8W7H1	-	-
ENST00000366545.4	PLD5-002	2729	109aa	ENSP00000355503.4	Nonsense mediated decay		J3KP61	-	-
ENST00000467561.1	PLD5-003	1353	197aa	ENSP00000440132.1	Nonsense mediated decay		F5GXZ8 J3KP61	-	-
ENST00000474177.1	PLD5-005	557	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 1,353 bps, Translation length: 197 residues

Version

ENST00000467561.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000096189 (version 2)

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Transcript: ENST00000467561.1 PLD5-003

Summary