Transcript: ENST00000519492.1 EGR3-002

Description

early growth response 3 [Source:HGNC Symbol;Acc:3240]

Gene Synonyms

EGR-3, PILOT

Location

About this transcript

This transcript has 3 exons, is annotated with 2 domains and features, is associated with 1676 variant alleles and maps to 256 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000317216.2	EGR3-001	4336	387aa	ENSP00000318057.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6033	B4DH80 Q06889	NM_004430.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000522910.1	EGR3-003	1553	349aa	ENSP00000430310.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56528	B4DH80 Q06889	NM_001199880.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000519492.1	EGR3-002	1500	71aa	ENSP00000429370.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RIM5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000524088.1	EGR3-004	1230	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000518773.1	EGR3-005	505	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 1,500 bps, Translation length: 71 residues

Version

ENST00000519492.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000375024 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.