Transcript: ENST00000532155.1 GDPD4-003

Description

glycerophosphodiester phosphodiesterase domain containing 4 [Source:HGNC Symbol;Acc:24849]

Gene Synonyms

GDE6, UGPQ

Location

Chromosome 11: 76,981,965-77,012,732 reverse strand.

About this transcript

This transcript has 4 exons, is associated with 12897 variant alleles and maps to 90 oligo probes.

Gene

This transcript is a product of gene ENSG00000178795.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000315938.4	GDPD4-001	2533	520aa	ENSP00000320815.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8249	Q6W3E5	NM_182833.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000376217.2	GDPD4-002	2502	623aa	ENSP00000365390.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6W3E5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000527489.1	GDPD4-005	574	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000532907.1	GDPD4-006	518	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000534245.1	GDPD4-004	560	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000532155.1	GDPD4-003	546	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 546 bps,

Version

ENST00000532155.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000382078 (version 1)

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Transcript: ENST00000532155.1 GDPD4-003

Summary